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SRX006703: Sequencing of the Fusobacterium periodonticum D10 genome on 454
2 LS454 (454 GS FLX) runs: 5,236 spots, 1.6M bases, 3.1Mb downloads

UUID: 9cb638bc-cd88-479f-98f9-faa0a653240f
Design: 10X fragment; 10X physical paired
Submitted by: Broad Institute (BI)
Study: Reference strain for the Human Microbiome Project
PRJNA34699 • SRP000961 • All experiments • All runs
show Abstracthide Abstract
This strain will be used for comparative genome analysis.
Sample: Generic sample from Fusobacterium periodonticum D10
SAMN00103202 • SRS004185 • All experiments • All runs
Organism: Fusobacterium periodonticum D10
Library:
Name: 454-1249
Instrument: 454 GS FLX
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Spot descriptor:
          barcode
Group tagBasecalls
TATTCGTC
13  forward

Experiment attributes: (show all 6 attributes...) (hide...)
analysis_type: Assembly
gssr_id: 22683.2
lsid: BROAD:SEQUENCING_SAMPLE:22683.2
material_type: Genomic DNA
project: G1498
work_request: 16859
Pipeline: show...hide...
NameStepProgramVersion
base caller2008-06-24 10:42:38.0454BaseCaller1.1.03.24
Runs: 2 runs, 5,236 spots, 1.6M bases, 3.1Mb
Run# of Spots# of BasesSizePublished
SRR0190383,9021.2M2.3Mb2009-07-21
SRR0190391,334396,486842,845b2011-09-09

ID:
6962

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